API for zslastman/RiboStan
Estimates Isoform Specific RPF Footprint Densities
| Global functions | |
|---|---|
| %>% | Man page |
| add_cor_offset | Man page Source code |
| addphase | Man page Source code |
| chr22_anno | Man page |
| convert_gtf | Man page |
| export_codon_dts | Man page |
| fmcols | Man page Source code |
| ftest_orfs | Man page |
| ftestvect | Man page Source code |
| gene_level_elong | Man page |
| gene_level_expr | Man page |
| get_cds_codons | Man page Source code |
| get_cds_reads | Man page |
| get_cdsgrl | Man page |
| get_codon_occs | Man page |
| get_codposdf | Man page Source code |
| get_cov_rust_scores | Man page |
| get_exprfile | Man page |
| get_incl_max_offsets | Man page |
| get_kl_df | Man page |
| get_metacodon_profs | Man page |
| get_offsets | Man page |
| get_orf_elong | Man page |
| get_psite_gr | Man page |
| get_psitecov | Man page |
| get_read_spmat | Man page |
| get_readgr | Man page |
| get_readlens | Man page Source code |
| get_ribofasta_anno | Man page |
| get_ritpms | Man page |
| get_sitedf | Man page |
| get_trspace_cds | Man page |
| hasMstart | Man page |
| id | Source code |
| is_out_of_bounds | Man page Source code |
| load_annotation | Man page |
| make_ext_fasta | Man page |
| mergeseqlevels | Man page |
| metacodondf | Man page |
| most_freq | Man page |
| offsets_df | Man page |
| optimize_ritpms | Man page |
| order_grl_st | Man page Source code |
| periodicity_filter_uORFs | Man page |
| plot_kl_dv | Man page |
| read_ribobam | Man page |
| resize_grl | Man page Source code |
| resize_grl_endfix | Man page Source code |
| resize_grl_startfix | Man page Source code |
| rpfs | Man page |
| sample_cols_spmat | Man page |
| sample_cov_gr | Man page |
| select_offsets | Man page |
| sort_grl_st | Man page Source code |
| spl_mapFromTranscripts | Man page Source code |
| subset_annotation | Man page |
| width1grs | Man page |
