ftest_orfs: Run Multitaper Tests on All ORFs

ftest_orfsR Documentation

Run Multitaper Tests on All ORFs

Description

Run Multitaper Tests on All ORFs

Usage

ftest_orfs(psites, anno, n_cores = 1)

Arguments

psites

A GRanges object containing psites

anno

annotation object

n_cores

number of cores to use

Details

This function applies a multitaper test to

Value

a numeric vector with the spectral coefficient at 0.333... and the pvalue for the test

Author(s)

Dermot Harnett, dermot.p.harnett@gmail.com

Examples

data(chr22_anno)
data(rpfs)
data(offsets_df)
psites <- get_psite_gr(rpfs, offsets_df, chr22_anno)
ftests <- ftest_orfs(psites %>% head(10000), chr22_anno, 
  n_cores=1)

zslastman/RiboStan documentation built on June 12, 2024, 1:59 a.m.