ftest_orfs: Run Multitaper Tests on All ORFs
In zslastman/RiboStan: Estimates Isoform Specific RPF Footprint Densities
ftest_orfs R Documentation
Run Multitaper Tests on All ORFs
Description
Run Multitaper Tests on All ORFs
Usage
ftest_orfs(psites, anno, n_cores = 1)
Arguments
psites
A GRanges object containing psites
anno
annotation object
n_cores
number of cores to use
Details
This function applies a multitaper test to
Value
a numeric vector with the spectral coefficient at 0.333...
and the pvalue for the test
Author(s)
Dermot Harnett, dermot.p.harnett@gmail.com
Examples
data(chr22_anno)
data(rpfs)
data(offsets_df)
psites <- get_psite_gr(rpfs, offsets_df, chr22_anno)
ftests <- ftest_orfs(psites %>% head(10000), chr22_anno,
n_cores=1)
zslastman/RiboStan documentation built on April 6, 2024, 1:35 p.m.
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| ftest_orfs | R Documentation |
Run Multitaper Tests on All ORFs
Description
Run Multitaper Tests on All ORFs
Usage
ftest_orfs(psites, anno, n_cores = 1)
Arguments
psites |
A GRanges object containing psites |
anno |
annotation object |
n_cores |
number of cores to use |
Details
This function applies a multitaper test to
Value
a numeric vector with the spectral coefficient at 0.333... and the pvalue for the test
Author(s)
Dermot Harnett, dermot.p.harnett@gmail.com
Examples
data(chr22_anno)
data(rpfs)
data(offsets_df)
psites <- get_psite_gr(rpfs, offsets_df, chr22_anno)
ftests <- ftest_orfs(psites %>% head(10000), chr22_anno,
n_cores=1)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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