is_out_of_bounds: Check if GRanges elements are out of chromosome bounds

View source: R/anno.R

is_out_of_boundsR Documentation

Check if GRanges elements are out of chromosome bounds

Description

Given a grangelist of say N genes with X_n exons, this yields a length N vector pulled from the mcols of the first element of each list element

Usage

is_out_of_bounds(gr, si = seqinfo(gr))

Arguments

gr

GRanges or GrangesList of elements

si

seqinfo information about length and names of chromosomes

Value

a logical vector valued TRUE if GRanges elements are out of the chromosome bounds

Author(s)

Dermot Harnett, dermot.p.harnett@gmail.com


zslastman/RiboStan documentation built on June 12, 2024, 1:59 a.m.