addphase: Add 'phase' column to a set of reads, given a vector of cds...
In zslastman/RiboStan: Estimates Isoform Specific RPF Footprint Densities
addphase R Documentation
Add 'phase' column to a set of reads, given a vector of cds starts
Description
Given rpfs, and named vectors of starts and stops, this adds the 'phase'
to the reads
Usage
addphase(gr, cdsstarts)
Arguments
gr
GRanges object with RPFs
cdsstarts
named vector of cds starts
Value
the rpf granges but wth a 'phase' column
Author(s)
Dermot Harnett, dermot.p.harnett@gmail.com
zslastman/RiboStan documentation built on April 6, 2024, 1:35 p.m.
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| addphase | R Documentation |
Add 'phase' column to a set of reads, given a vector of cds starts
Description
Given rpfs, and named vectors of starts and stops, this adds the 'phase' to the reads
Usage
addphase(gr, cdsstarts)
Arguments
gr |
GRanges object with RPFs |
cdsstarts |
named vector of cds starts |
Value
the rpf granges but wth a 'phase' column
Author(s)
Dermot Harnett, dermot.p.harnett@gmail.com
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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