ftestvect: Test a numeric vector for periodicity using the multitaper...
In zslastman/RiboStan: Estimates Isoform Specific RPF Footprint Densities
View source: R/periodicity_tests.R
ftestvect R Documentation
Test a numeric vector for periodicity using the multitaper package
Description
Test a numeric vector for periodicity using the multitaper package
Usage
ftestvect(psit, k = 24, bw = 12)
Arguments
psit
A list of SimpleRleLists - RPF coverage split by readlength
k
The number of slepians to use for the test
bw
The bandwidth to use for the test
Details
This function pads short vectors up to 50, and performs a multitaper test for 3bp
peridicity on it's input, returning a spectral coefficient and p-value
Value
a numeric vector with the spectral coefficient at 0.333... and the pvalue for the test
Author(s)
Dermot Harnett, dermot.p.harnett@gmail.com
zslastman/RiboStan documentation built on June 12, 2024, 1:59 a.m.
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View source: R/periodicity_tests.R
| ftestvect | R Documentation |
Test a numeric vector for periodicity using the multitaper package
Description
Test a numeric vector for periodicity using the multitaper package
Usage
ftestvect(psit, k = 24, bw = 12)
Arguments
psit |
A list of SimpleRleLists - RPF coverage split by readlength |
k |
|
bw |
|
Details
This function pads short vectors up to 50, and performs a multitaper test for 3bp peridicity on it's input, returning a spectral coefficient and p-value
Value
a numeric vector with the spectral coefficient at 0.333... and the pvalue for the test
Author(s)
Dermot Harnett, dermot.p.harnett@gmail.com
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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