dyeBiasCorrTypeINorm: Dye bias correction by matching green and red to mid point
In sesame: Tools For Analyzing Illumina Infinium DNA Methylation Arrays
Description
Usage
Arguments
Value
Examples
Description
This function compares the Type-I Red probes and Type-I Grn probes and
generates and mapping to correct signal of the two channels to the middle.
The function takes one single SigSet and returns a SigSet
with dye bias corrected.
Usage
1
dyeBiasCorrTypeINorm(sset)
Arguments
sset
a SigSet
Value
a SigSet after dye bias correction.
Examples
1
2
sset <- sesameDataGet('EPIC.1.LNCaP')$sset
sset.db <- dyeBiasCorrTypeINorm(sset)
sesame documentation built on Nov. 15, 2020, 2:08 a.m.
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Description Usage Arguments Value Examples
Description
This function compares the Type-I Red probes and Type-I Grn probes and
generates and mapping to correct signal of the two channels to the middle.
The function takes one single SigSet and returns a SigSet
with dye bias corrected.
Usage
1 | dyeBiasCorrTypeINorm(sset)
|
Arguments
sset |
a |
Value
a SigSet after dye bias correction.
Examples
1 2 | sset <- sesameDataGet('EPIC.1.LNCaP')$sset
sset.db <- dyeBiasCorrTypeINorm(sset)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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