getSexInfo: Get sex-related information
In sesame: Tools For Analyzing Illumina Infinium DNA Methylation Arrays
Description
Usage
Arguments
Value
Examples
Description
The function takes a SigSet and returns a vector of three
numerics: the median intensity of chrY probes; the median intensity of
chrX probes; and fraction of intermediate chrX probes. chrX and chrY
probes excludes pseudo-autosomal probes.
Usage
1
getSexInfo(sset)
Arguments
sset
a SigSet
Value
medianY and medianX, fraction of XCI, methylated and unmethylated X
probes, median intensities of auto-chromosomes.
Examples
1
2
sset <- makeExampleSeSAMeDataSet()
getSexInfo(sset)
sesame documentation built on Nov. 15, 2020, 2:08 a.m.
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Description Usage Arguments Value Examples
Description
The function takes a SigSet and returns a vector of three
numerics: the median intensity of chrY probes; the median intensity of
chrX probes; and fraction of intermediate chrX probes. chrX and chrY
probes excludes pseudo-autosomal probes.
Usage
1 | getSexInfo(sset)
|
Arguments
sset |
a |
Value
medianY and medianX, fraction of XCI, methylated and unmethylated X probes, median intensities of auto-chromosomes.
Examples
1 2 | sset <- makeExampleSeSAMeDataSet()
getSexInfo(sset)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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