makeExampleSeSAMeDataSet: Make a simulated SeSAMe data set
In sesame: Tools For Analyzing Illumina Infinium DNA Methylation Arrays
Description
Usage
Arguments
Value
Examples
View source: R/simulate_data.R
Description
Constructs a simulated SigSet dataset. For the given platform,
randomly simulate methylated and unmethylated allele signals. In-band signals
were simulated using a N(4000, 200) normal distribution. Out-of-band signals
were simulated using a N(400, 200) normal distribution. Control signals were
simulated using a N(400, 300) normal distribution.
Usage
1
makeExampleSeSAMeDataSet(platform = c("HM450", "EPIC", "HM27"))
Arguments
platform
optional, HM450, EPIC or HM27
Value
Object of class SigSet
Examples
1
sset <- makeExampleSeSAMeDataSet()
sesame documentation built on Nov. 15, 2020, 2:08 a.m.
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Description Usage Arguments Value Examples
View source: R/simulate_data.R
Description
Constructs a simulated SigSet dataset. For the given platform,
randomly simulate methylated and unmethylated allele signals. In-band signals
were simulated using a N(4000, 200) normal distribution. Out-of-band signals
were simulated using a N(400, 200) normal distribution. Control signals were
simulated using a N(400, 300) normal distribution.
Usage
1 | makeExampleSeSAMeDataSet(platform = c("HM450", "EPIC", "HM27"))
|
Arguments
platform |
optional, HM450, EPIC or HM27 |
Value
Object of class SigSet
Examples
1 | sset <- makeExampleSeSAMeDataSet()
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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