inferSexKaryotypes: Infer Sex Karyotype

Description Usage Arguments Value Examples

View source: R/sesame.R

Description

The function takes a SigSet and infers the sex chromosome Karyotype and presence/absence of X-chromosome inactivation (XCI). chrX, chrY and XCI are inferred relatively independently. This function gives a more detailed look of potential sex chromosome aberrations.

Usage

1

Arguments

sset

a SigSet

Value

Karyotype string, with XCI

Examples

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sset <- sesameDataGet('EPIC.1.LNCaP')$sset
inferSexKaryotypes(sset)

sesame documentation built on Nov. 15, 2020, 2:08 a.m.