Files in biomod2

Ensemble Platform for Species Distribution Modeling

README.md R/biomod2_classes_2.R R/BIOMOD_FormatingData.R R/BIOMOD_Modeling.R R/BIOMOD_EnsembleModeling.R R/biomod2_data.R R/DEPRECATED.R R/BIOMOD_LoadModels.R R/biomod2_classes_4.R R/bm_PseudoAbsences.R R/bm_ModelingOptions.R R/bm_MakeFormula.R R/bm_PlotEvalBoxplot.R R/bm_VariablesImportance.R R/biomod2_internal.R R/bm_Tuning.R R/biomod2_classes_5.R R/bm_CrossValidation.R R/bm_RunModelsLoop.R R/bm_SampleFactorLevels.R R/BIOMOD_EnsembleForecasting.R R/bm_PlotResponseCurves.R R/bm_PlotEvalMean.R R/BIOMOD_Projection.R R/BIOMOD_RangeSize.R R/biomod2_globalVariables.R R/bm_FindOptimStat.R R/biomod2_classes_0.R R/biomod2_classes_3.R R/bm_SRE.R R/bm_PlotRangeSize.R R/bm_PlotVarImpBoxplot.R R/zzz.R R/biomod2_classes_1.R R/biomod2-package.R R/bm_BinaryTransformation.R R/bm_SampleBinaryVector.R inst/doc/vignette_pseudoAbsences.Rmd inst/doc/vignette_variability.Rmd inst/doc/vignette_dataPreparation.Rmd inst/doc/examples_2_secundaryFunctions.Rmd inst/doc/vignette_videos.Rmd inst/doc/examples_1_mainFunctions.Rmd inst/doc/vignette_modelingOptions.Rmd inst/doc/news.Rmd inst/doc/vignette_presentation.Rmd inst/doc/vignette_crossValidation.Rmd vignettes/vignette_pseudoAbsences.Rmd vignettes/vignette_variability.Rmd vignettes/vignette_dataPreparation.Rmd vignettes/examples_2_secundaryFunctions.Rmd vignettes/vignette_videos.Rmd vignettes/examples_1_mainFunctions.Rmd vignettes/vignette_modelingOptions.Rmd vignettes/news.Rmd vignettes/vignette_presentation.Rmd vignettes/vignette_crossValidation.Rmd vignettes/pictures/examples_2_plot1.pdf vignettes/pictures/SCHEMA_BIOMOD2_WORKFLOW_functions.pdf vignettes/pictures/examples_2_plot2.pdf vignettes/pictures/biomod2_presentation.workflow_05_2024.pdf man/makeFormula-deprecated.Rd man/BIOMOD.stored.data.Rd man/bm_PlotResponseCurves.Rd man/dot-categorical2numeric.Rd man/bm_VariablesImportance.Rd man/bm_SampleBinaryVector.Rd man/predict.bm.Rd man/bm_FindOptimStat.Rd man/bm_RunModelsLoop.Rd man/OptionsBigboss.Rd man/BIOMOD.options.dataset.Rd man/getters.out.Rd man/BinaryTransformation-deprecated.Rd man/biomod2_ensemble_model.Rd man/sre-deprecated.Rd man/bioclim_future.Rd man/biomod2_model.Rd man/BIOMOD_EnsembleModeling.Rd man/calculate.stat-deprecated.Rd man/dot-transform.outputs.list-deprecated.Rd man/bm_CrossValidation.Rd man/BIOMOD.formated.data.PA.Rd man/bm_PlotVarImpBoxplot.Rd man/BIOMOD.projection.out.Rd man/DataSpecies.Rd man/bm_PlotEvalMean.Rd man/bm_SRE.Rd man/BIOMOD_PresenceOnly-deprecated.Rd man/getters.bm.Rd man/bm_PseudoAbsences.Rd man/check_duplicated_cells.Rd man/models_scores_graph-deprecated.Rd man/dot-get_env_class.Rd man/zzz_bm.Rd man/bm_Tuning.Rd man/bm_PlotEvalBoxplot.Rd man/BIOMOD_LoadModels.Rd man/variables_importance-deprecated.Rd man/biomod2-deprecated.Rd man/bm_BinaryTransformation.Rd man/rast.has.values.Rd man/BIOMOD.models.options.Rd man/response.plot2-deprecated.Rd man/BIOMOD_RangeSize.Rd man/bioclim_current.Rd man/BIOMOD.ensemble.models.out.Rd man/ModelsTable.Rd man/sample.factor.levels-deprecated.Rd man/BIOMOD_FormatingData.Rd man/getStatOptimValue-deprecated.Rd man/BIOMOD_CrossValidation-deprecated.Rd man/Find.Optim.Stat-deprecated.Rd man/BIOMOD.options.default.Rd man/bm_MakeFormula.Rd man/BIOMOD_EnsembleForecasting.Rd man/dot-load_gam_namespace.Rd man/plot.Rd man/BIOMOD_tuning-deprecated.Rd man/predict2.em.Rd man/BIOMOD_Modeling.Rd man/bm_ModelingOptions.Rd man/dot-get_categorical_names.Rd man/BIOMOD_Projection.Rd man/BIOMOD.formated.data.Rd man/summary.Rd man/predict2.bm.Rd man/bm_PlotRangeSize.Rd man/bm_SampleFactorLevels.Rd man/ProbDensFunc-deprecated.Rd man/dot-transform_model.as.col.Rd man/predict.em.Rd man/load_stored_object.Rd man/BIOMOD.models.out.Rd