checkInputValidity: Check the validity of the input phylogenetic profile file
In BIONF/PhyloProfile: PhyloProfile
View source: R/parseMainInput.R
checkInputValidity R Documentation
Check the validity of the input phylogenetic profile file
Description
Check if input file has one of the following format: orthoXML,
multiple FASTA, tab-delimited matrix (wide or long), or list of OMA IDs.
Usage
checkInputValidity(filein)
Arguments
filein
input file
Value
The format of the input file format, or type of error
Author(s)
Vinh Tran tran@bio.uni-frankfurt.de
See Also
checkOmaID
Examples
filein <- system.file(
"extdata", "test.main.wide", package = "PhyloProfile", mustWork = TRUE
)
checkInputValidity(filein)
BIONF/PhyloProfile documentation built on Nov. 7, 2024, 8:31 p.m.
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View source: R/parseMainInput.R
| checkInputValidity | R Documentation |
Check the validity of the input phylogenetic profile file
Description
Check if input file has one of the following format: orthoXML, multiple FASTA, tab-delimited matrix (wide or long), or list of OMA IDs.
Usage
checkInputValidity(filein)
Arguments
filein |
input file |
Value
The format of the input file format, or type of error
Author(s)
Vinh Tran tran@bio.uni-frankfurt.de
See Also
checkOmaID
Examples
filein <- system.file(
"extdata", "test.main.wide", package = "PhyloProfile", mustWork = TRUE
)
checkInputValidity(filein)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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