getAllDomainsOma: Create domain annotation dataframe from a raw OMA dataframe

In BIONF/PhyloProfile: PhyloProfile

Create domain annotation dataframe from a raw OMA dataframe

Description

Create domain annotation dataframe from a raw OMA dataframe

Usage

getAllDomainsOma(finalOmaDf = NULL)

Arguments

finalOmaDf

raw OMA data for a list of proteins (see ?getDataForOneOma)

Value

Dataframe of the domain annotation used for PhyloProfile, which contains seed IDs, ortholog IDs, ortholog lengths, annotated features, start and end positions of those features.

Author(s)

Vinh Tran [e-mail]

See Also

getDataForOneOma

Examples

print("Uncomment the following line to run the function")
# omaData <- getDataForOneOma("HUMAN29397", "OG")
# getAllDomainsOma(omaData)

BIONF/PhyloProfile documentation built on April 14, 2024, 10:39 p.m.