createUnrootedTree: Create unrooted tree from a taxonomy matrix
In BIONF/PhyloProfile: PhyloProfile
View source: R/parsePhylotree.R
createUnrootedTree R Documentation
Create unrooted tree from a taxonomy matrix
Description
Create unrooted tree from a taxonomy matrix
Usage
createUnrootedTree(df)
Arguments
df
data frame contains taxonomy matrix used for generating tree
Value
A unrooted taxonomy tree as an object of class "phylo".
Author(s)
Vinh Tran tran@bio.uni-frankfurt.de
See Also
taxa2dist for distance matrix generation from a
taxonomy matrix, getTaxonomyMatrix for getting taxonomy
matrix, ppTaxonomyMatrix for a demo taxonomy matrix data
Examples
data("ppTaxonomyMatrix", package = "PhyloProfile")
createUnrootedTree(ppTaxonomyMatrix)
BIONF/PhyloProfile documentation built on Dec. 18, 2024, 7:33 a.m.
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View source: R/parsePhylotree.R
| createUnrootedTree | R Documentation |
Create unrooted tree from a taxonomy matrix
Description
Create unrooted tree from a taxonomy matrix
Usage
createUnrootedTree(df)
Arguments
df |
data frame contains taxonomy matrix used for generating tree |
Value
A unrooted taxonomy tree as an object of class "phylo".
Author(s)
Vinh Tran tran@bio.uni-frankfurt.de
See Also
taxa2dist for distance matrix generation from a
taxonomy matrix, getTaxonomyMatrix for getting taxonomy
matrix, ppTaxonomyMatrix for a demo taxonomy matrix data
Examples
data("ppTaxonomyMatrix", package = "PhyloProfile")
createUnrootedTree(ppTaxonomyMatrix)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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