getFastaFromFasInput: Get fasta sequences from main input file in multi-fasta...
In BIONF/PhyloProfile: PhyloProfile
getFastaFromFasInput R Documentation
Get fasta sequences from main input file in multi-fasta format
Description
Get fasta sequences from main input file in multi-fasta format
Usage
getFastaFromFasInput(seqIDs = NULL, file = NULL)
Arguments
seqIDs
list of sequences IDs. Set seqIDs = "all" if you want to get
all fasta sequences from the input file.
file
raw phylogenetic profile input file in multi-fasta format.
Value
A dataframe with one column contains sequences in fasta format.
Author(s)
Vinh Tran tran@bio.uni-frankfurt.de
Examples
file <- system.file(
"extdata", "test.main.fasta",
package = "PhyloProfile", mustWork = TRUE
)
getFastaFromFasInput("all", file)
BIONF/PhyloProfile documentation built on Aug. 3, 2024, 11:53 a.m.
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| getFastaFromFasInput | R Documentation |
Get fasta sequences from main input file in multi-fasta format
Description
Get fasta sequences from main input file in multi-fasta format
Usage
getFastaFromFasInput(seqIDs = NULL, file = NULL)
Arguments
seqIDs |
list of sequences IDs. Set seqIDs = "all" if you want to get all fasta sequences from the input file. |
file |
raw phylogenetic profile input file in multi-fasta format. |
Value
A dataframe with one column contains sequences in fasta format.
Author(s)
Vinh Tran tran@bio.uni-frankfurt.de
Examples
file <- system.file(
"extdata", "test.main.fasta",
package = "PhyloProfile", mustWork = TRUE
)
getFastaFromFasInput("all", file)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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