TransferDataSeurat2 | R Documentation |
Transfer data from a Seurat object to STvEA.data object
TransferDataSeurat2(
seurat_object,
embedding_reduction = NULL,
latent_reduction = NULL,
latent_dims = 20
)
seurat_object |
Seurat class object |
embedding_reduction |
(optional) name of the slot holding the dimension reduction embedding used for visualization. Examples: "umap", "tsne" |
latent_reduction |
(optional) name of the lot holding the dimension reduction to be used for the CITE-seq mRNA latent space. Examples: "pca" |
latent_dims |
number of dimensions to use for the latent space, not used if latent_reduction is not defined |
STvEA.data class object
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