plotSubstypeNumberPerSample: plotSubstypeNumberPerSample

In FunGeST/Palimpsest: Package

plotSubstypeNumberPerSample

Description

plotSubstypeNumberPerSample

Usage

plotSubstypeNumberPerSample(
  vcf,
  sample.col = "sample",
  substype.col = "substype",
  plot.file = NULL,
  ...
)

Arguments

vcf	vcf data frame containing the mutations
sample.col	Sample column name in vcf
substype.col	Substitution types column name in vcf
plot.file	File to which the plot should be saved (if left NULL, plot will be sent directly to the active window)
...

FunGeST/Palimpsest documentation built on June 2, 2024, 4:21 a.m.