API for RyanYip-Kat/yipCat
Some function like ArchR style in Seurat Object

Global functions
.InteractionScore Source code
.Seuratinfo Source code
.addDoubScores Source code
.batchlapply Man page
.combn.ident Source code
.computeKNN Man page
.computeLSI Man page Source code
.interScore Source code
.projectLSI Man page Source code
.safelapply Man page
.simulateProjectDoublets Source code
.tempfile Man page
.transform10XH5 Man page Source code
.writeCode Man page Source code
ArchRHeatmap Man page Source code
ArchRPalettes Man page
CPDBDotData Man page Source code
CPDBDotplot Man page Source code
CPDBHeatmapData Man page Source code
CPDBHeatmaps Man page Source code
CalculateRogue Man page Source code
CustomInteractionScore Man page Source code
Cytof2Seurat Man page Source code
DAPlot Man page Source code
DetermineK Man page Source code
DoLikeArchRHeatmap Man page Source code
EmbPlot Man page Source code
Entropy Man page Source code
GgPlot Man page Source code
ImputeWeights Man page Source code
MyimputeMatrix Man page Source code
MyplotEmbedding Man page Source code
MyplotGroups Man page Source code
MyplotPDF Man page
SE_fun Man page Source code
SEplot Man page Source code
addSeuratTrajectory Man page Source code
ageScore Man page Source code
binarySort Source code
calDoubletScores Man page Source code
centerRollMean Man page
checkShowLegend Source code
colorMapAnno Source code
colorMapForCH Source code
config Man page
deDF Man page
ent.toli Man page Source code
entropy_fit Man page Source code
exportCellPhoneDB Man page Source code
exportEmbCol Man page Source code
findCellPhoneDB Man page
fixPlotSize Man page Source code
generateCloupe Man page Source code
getDoubletsDF Man page
getGroupPval Man page Source code
getImputeWeight Man page Source code
getSeuratTrajectory Man page
ggAlignPlots Man page
ggGroup Man page
ggHex Man page
ggOneToOne Man page
ggPoint Man page Source code
installCellphonedb Man page Source code
isDiscrete Man page
makedir Man page Source code
matr.filter Man page Source code
mergeParams Man page
metascapeBarPlot Man page Source code
paletteContinuous Man page Source code Source code
paletteDiscrete Source code Source code
plotSeuratTrajectory Man page
quantileCut Man page
rogue Man page Source code
rogue.boxplot Man page Source code
scMatrix2CellRangerH5 Man page
theme_ArchR Man page
wrapperROGUE Man page Source code
RyanYip-Kat/yipCat documentation built on Dec. 18, 2021, 11:55 a.m.