markerComboCounts: Find all marker combinations existing in data and count cells...

Description Usage Arguments Value

View source: R/marker_combo_table.R

Description

Each row contains cell count, percentage and cumulative percentage of all cells, and a column for each marker, with an "X" indicating that marker is part of the combination in that row

Usage

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markerComboCounts(markers, dataFiles = NULL, dat = NULL, outFile = NULL,
  oneSheet = TRUE)

Arguments

markers

vector of individual markers to be counted

dataFiles

vector of *.rda files containing Halo data

outFile

name of *.xlsx file to write final tables; default=NULL

Value

list of tables, one for all samples and one for each sample


caitlinjones/halo documentation built on May 7, 2019, 8 a.m.