Description Usage Arguments Value
Print density plots
1 2 3 4 |
den |
tibble containing densities for all markers to be plotted |
bandWidth |
if plotting by distance intervals from infiltration boundary, this is the size of each interval |
config |
configuration of plots (already parsed) |
yScaleConsistency |
level on which y-scales should be the same; choices: ["byPopulation"|"all"|"markerSet"] |
absoluteDensity |
logical; print plots of absolute density values; default=TRUE |
densityPercentage |
logical; print plots of density percentage values; default=TRUE |
byFOV |
logical; print plots of each FOV (all FOV on one panel); default=TRUE |
summarize |
logical; print summary plots, showing density of ALL FOV together; default=TRUE |
stacked |
logical; for plots with all exclusive markers, print stacked bar plots; default=TRUE |
nothing
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