exportCyjs: exportCyjs

In noriakis/wcGeneSummary: visualization and interpretation of textual information from omics summary data through network analysis

exportCyjs

Description

Export Cytoscape.js from the network

Usage

exportCyjs(g, rootDir, netDir, bubble = FALSE, withEdge = TRUE)

Arguments

g	igraph object
rootDir	root directory path
netDir	directory to store scripts
bubble	default to FALSE, if node attribute "group" is available, use the grouping to draw bubblesets using 'https://github.com/upsetjs/cytoscape.js-bubblesets'
withEdge	connect edges or not in bubblesets

Details

Export Cytoscape.js script, HTML and stylesheet for the graph and image

Value

return nothing, export to a specified directory

Examples

library(igraph)
g <- graph_from_literal( ME1-+ME2 )
V(g)$image <- c("path1","path2")
V(g)$shape <- c("image","image")
V(g)$size <- c(1,1)
## Not run: exportCyjs(g, "./", "net")

noriakis/wcGeneSummary documentation built on May 31, 2024, 4:42 p.m.