plotORA: plotORA
In noriakis/wcGeneSummary: visualization and interpretation of textual information from omics summary data through network analysis
plotORA R Documentation
plotORA
Description
plot volcano-plot like plot for ORA results
Usage
plotORA(x, thresh = 0.001)
Arguments
x
biotext object
thresh
hline to draw in plot
Details
Plot the volcano-plot like plot for the ORA results
using the biotext object. The ORA should be performed beforehand
by specifying ora option to TRUE.
Value
volcano plot for ORA results
Examples
testgenes <- c("DDX41","IRF3","XRCC1","ERCC1","ERCC2","ERCC3")
net1 <- refseq(testgenes, ora=TRUE)
plotORA(net1)
noriakis/wcGeneSummary documentation built on May 31, 2024, 4:42 p.m.
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| plotORA | R Documentation |
plotORA
Description
plot volcano-plot like plot for ORA results
Usage
plotORA(x, thresh = 0.001)
Arguments
x |
biotext object |
thresh |
hline to draw in plot |
Details
Plot the volcano-plot like plot for the ORA results using the biotext object. The ORA should be performed beforehand by specifying ora option to TRUE.
Value
volcano plot for ORA results
Examples
testgenes <- c("DDX41","IRF3","XRCC1","ERCC1","ERCC2","ERCC3")
net1 <- refseq(testgenes, ora=TRUE)
plotORA(net1)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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