obtain_pubmed: obtain_pubmed

In noriakis/wcGeneSummary: visualization and interpretation of textual information from omics summary data through network analysis

obtain_pubmed

Description

Obtain PubMed text data

Usage

obtain_pubmed(
  queries,
  target = "title",
  delim = "OR",
  api_key = NULL,
  ret_max = 10,
  limit = 10,
  sort_order = "relevance",
  quote = FALSE
)

Arguments

queries	query list
target	title or abstract
delim	delimiter for query, default to OR
api_key	API key for PubMed
ret_max	max articles to get
limit	query number limit
sort_order	sort by relevance or pubdate
quote	whether to quote each query

Details

Obtain pubmed textual data and makes a biotext object.

Value

biotext class object

See Also

generalf

noriakis/wcGeneSummary documentation built on April 22, 2024, 7:12 a.m.