process_network_manual: process_network_manual

In noriakis/wcGeneSummary: visualization and interpretation of textual information from omics summary data through network analysis

process_network_manual

Description

Process graph made from user-specified data.frame

Usage

process_network_manual(
  ret,
  delete_zero_degree = TRUE,
  make_upper = NULL,
  query_plot = FALSE,
  drop_ID = TRUE
)

Arguments

ret	biotext class object
delete_zero_degree	delete zero degree nodes
make_upper	make these words uppercase
query_plot	plot the column other than text
drop_ID	drop 'ID' column

Details

Process the graph obtained from user data, like associating words to the other variables.

Value

biotext class object

Examples

obtain_manual(data.frame(text=c("test4 test4",
                                "test3 test3 testi",
                                "test2 test2"))) |>
make_corpus(num_only=TRUE) |>
make_TDM() |>
make_graph() |>
process_network_manual()

noriakis/wcGeneSummary documentation built on May 31, 2024, 4:42 p.m.