perform_ora: perform_ora

View source: R/steps.R

perform_oraR Documentation

perform_ora

Description

Performs ORA on obtained text data.

Usage

perform_ora(ret, threshold = 0.05)

Arguments

ret

biotext class

threshold

ORA threshold to filter (bonferroni-corrected p-value)

Details

Performs over representation analysis on the obtained text data. Used only with biotext object with type 'refseq'.

Value

biotext class object

Examples

testgenes <- c("IRF3","PNKP","DDX41","ERCC1","ERCC2","XRCC1")
obtain_refseq(testgenes) |> perform_ora()

noriakis/wcGeneSummary documentation built on May 31, 2024, 4:42 p.m.