import.CTSS: import.CTSS
In CAGEr: Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome mining
Description
Usage
Arguments
See Also
Examples
View source: R/ImportMethods.R
Description
Imports a "CTSS" file in a GPos object
Usage
1
import.CTSS(filepath)
Arguments
filepath
The path to the "CTSS" file.
Note that the format of the "CTSS" files handled in this function is not
the same as the FANTOM5 "CTSS" files (which are plain BED).
See Also
Other loadFileIntoGPos: bam2CTSS,
import.bam.ctss, import.bam,
import.bedCTSS,
import.bedScore,
import.bedmolecule,
loadFileIntoGPos,
moleculesGR2CTSS
Examples
1
CAGEr:::import.CTSS(system.file("extdata", "Zf.high.chr17.ctss", package = "CAGEr"))
CAGEr documentation built on Jan. 17, 2021, 2 a.m.
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Description Usage Arguments See Also Examples
View source: R/ImportMethods.R
Description
Imports a "CTSS" file in a GPos object
Usage
1 | import.CTSS(filepath)
|
Arguments
filepath |
The path to the "CTSS" file. Note that the format of the "CTSS" files handled in this function is not the same as the FANTOM5 "CTSS" files (which are plain BED). |
See Also
Other loadFileIntoGPos: bam2CTSS,
import.bam.ctss, import.bam,
import.bedCTSS,
import.bedScore,
import.bedmolecule,
loadFileIntoGPos,
moleculesGR2CTSS
Examples
1 | CAGEr:::import.CTSS(system.file("extdata", "Zf.high.chr17.ctss", package = "CAGEr"))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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