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SeSAMe-Minfi interaction
In sesame: Tools For Analyzing Illumina Infinium DNA Methylation Arrays
SeSAMe can be converted back and forth from Minfi RGChannelSet in multiple
ways. One can sesamize a minfi RGChannelSet which returns a GenomicRatioSet.
Here we are illustrating using the FlowSorted.Blood.450k object, which is
distributed in the minfi::RGChannelSet.
library(sesame)
library(FlowSorted.Blood.450k)
options(rmarkdown.html_vignette.check_title = FALSE)
grSet <- sesamize(FlowSorted.Blood.450k[,1:4])
grSet
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sesame documentation built on Nov. 15, 2020, 2:08 a.m.
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SeSAMe can be converted back and forth from Minfi RGChannelSet in multiple
ways. One can sesamize a minfi RGChannelSet which returns a GenomicRatioSet.
Here we are illustrating using the FlowSorted.Blood.450k object, which is
distributed in the minfi::RGChannelSet.
library(sesame) library(FlowSorted.Blood.450k) options(rmarkdown.html_vignette.check_title = FALSE)
grSet <- sesamize(FlowSorted.Blood.450k[,1:4]) grSet
Try the sesame package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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