RGChannelSetToSigSets: Convert RGChannelSet (minfi) to a list of SigSet (SeSAMe)

Description Usage Arguments Value Examples

View source: R/sesamize.R

Description

Notice the colData() and rowData() is lost. Most cases, rowData is empty anyway.

Usage

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RGChannelSetToSigSets(rgSet, manifest = NULL, BPPARAM = SerialParam())

Arguments

rgSet

a minfi::RGChannelSet

manifest

manifest file

BPPARAM

get parallel with MulticoreParam(n)

Value

a list of sesame::SigSet

Examples

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if (require(FlowSorted.Blood.450k)) {
    rgSet <- FlowSorted.Blood.450k[,1:2]
    ssets <- RGChannelSetToSigSets(rgSet)
}

sesame documentation built on Nov. 15, 2020, 2:08 a.m.