predictAgePheno: Phenotypic age predictor
In sesame: Tools For Analyzing Illumina Infinium DNA Methylation Arrays
Description
Usage
Arguments
Value
Examples
Description
The function takes a named numeric vector of beta values. The name attribute
contains the probe ID (cg, ch or rs IDs). The function looks for overlapping
probes and estimate age using Horvath aging model (Levine et al. 2018
Aging, 513 probes). The function outputs a single numeric of age in years.
Usage
1
predictAgePheno(betas)
Arguments
betas
a probeID-named vector of beta values
Value
age in years
Examples
1
2
betas <- sesameDataGet('HM450.1.TCGA.PAAD')$betas
predictAgePheno(betas)
sesame documentation built on Nov. 15, 2020, 2:08 a.m.
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Description Usage Arguments Value Examples
Description
The function takes a named numeric vector of beta values. The name attribute contains the probe ID (cg, ch or rs IDs). The function looks for overlapping probes and estimate age using Horvath aging model (Levine et al. 2018 Aging, 513 probes). The function outputs a single numeric of age in years.
Usage
1 | predictAgePheno(betas)
|
Arguments
betas |
a probeID-named vector of beta values |
Value
age in years
Examples
1 2 | betas <- sesameDataGet('HM450.1.TCGA.PAAD')$betas
predictAgePheno(betas)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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