visualizeSegments: Visualize segments
In sesame: Tools For Analyzing Illumina Infinium DNA Methylation Arrays
Description
Usage
Arguments
Details
Value
Examples
Description
The function takes a CNSegment object obtained from cnSegmentation
and plot the bin signals and segments (as horizontal lines).
Usage
1
visualizeSegments(seg, to.plot = NULL)
Arguments
seg
a CNSegment object
to.plot
chromosome to plot (by default plot all chromosomes)
Details
require ggplot2, scales
Value
plot graphics
Examples
1
2
3
seg <- sesameDataGet('EPIC.1.LNCaP')$seg
visualizeSegments(seg)
sesame documentation built on Nov. 15, 2020, 2:08 a.m.
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Description Usage Arguments Details Value Examples
Description
The function takes a CNSegment object obtained from cnSegmentation
and plot the bin signals and segments (as horizontal lines).
Usage
1 | visualizeSegments(seg, to.plot = NULL)
|
Arguments
seg |
a |
to.plot |
chromosome to plot (by default plot all chromosomes) |
Details
require ggplot2, scales
Value
plot graphics
Examples
1 2 3 | seg <- sesameDataGet('EPIC.1.LNCaP')$seg
visualizeSegments(seg)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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