alleles at markers
This function finds the alleles present at each marker. It can be viewed as an internal function. The user does not have to call it by himself.
character matrix (n x p) of individual haplotypes.
The returned value is a list of alleles for each marker.
S. Dejean, N. Oumouhou, D. Estivals, B. Mangin
publication to be submitted: C. Cierco-Ayrolles, S. Dejean, A. Legarra, H. Gilbert, T. Druet, F. Ytournel, D. Estivals, N. Oumouhou and B. Mangin. Combining linkage analysis and linkage disequilibrium for QTL fine mapping in animal pedigrees.