Description Usage Arguments Value Author(s) References See Also
The function computes the regression analysis with a dose haplotype effect and a sire effect in a design of half-sib families. It can be viewed as an internal function. The user does not have to call it by himself.
1 2 3 | obj.haplomax.HS.add(genea, perf, CD, assoc, res.structure, pi.hap, cor.pere,
cor.mere)
|
genea |
numeric matrix (number of individuals x 2) which contains individual index and corresponding sire index of each individual. |
perf |
numeric vector of length=number of individuals which contains the performances of individuals. |
CD |
numeric vector of length=number of individuals which contains the CD of individuals. var(perf$_i$)=error variance/CD$^2_i$ |
assoc |
numeric value, associated haplotype |
res.structure |
provided by |
pi.hap |
provided by |
cor.pere |
provided by |
cor.mere |
provided by |
The returned value is an object of aov class containing the dose haplotype + sire effect regression.
S. Dejean, N. Oumouhou, D. Estivals, B. Mangin
publication to be submitted: C. Cierco-Ayrolles, S. Dejean, A. Legarra, H. Gilbert, T. Druet, F. Ytournel, D. Estivals, N. Oumouhou and B. Mangin. Combining linkage analysis and linkage disequilibrium for QTL fine mapping in animal pedigrees.
corresp
, pi.hap
, structure.hap
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