The function recodes haplotypes of individuals in consecutive numeric values. It can be viewed as an internal function. The user does not have to call it by himself.
character matrix (number of individuals x number of markers) which contains the haplotype of individuals.
results provided by
the returned value is a numeric matrix (number of individuals x number of markers) which contains the recoded haplotype of individuals.
S. Dejean, N. Oumouhou, D. Estivals, B. Mangin
publication to be submitted: C. Cierco-Ayrolles, S. Dejean, A. Legarra, H. Gilbert, T. Druet, F. Ytournel, D. Estivals, N. Oumouhou and B. Mangin. Combining linkage analysis and linkage disequilibrium for QTL fine mapping in animal pedigrees.
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