depart.LD: starting values for the optimization of HAPimLD method
In HAPim: HapIM
Description
Usage
Arguments
Value
Author(s)
References
Description
the function calculates the starting values of the performance mean and the error variance for the optimization of HAPimLD method.
It can be viewed as an internal function.
The user does not have to call it by himself.
Usage
1
depart.LD(perf, CD)
Arguments
perf
numeric vector of length=number of individuals which contains the performances of individuals.
CD
numeric vector of length=number of individuals which contains the CD of individuals.
Value
The value returned is a numeric vector of length=2 which contains estimates of the performance mean and the error variance.
Author(s)
S. Dejean, N. Oumouhou, D. Estivals, B. Mangin
References
publication to be submitted: C. Cierco-Ayrolles, S. Dejean, A. Legarra, H. Gilbert,
T. Druet, F. Ytournel, D. Estivals, N. Oumouhou and B. Mangin.
Combining linkage analysis and linkage disequilibrium for QTL fine mapping in animal pedigrees.
HAPim documentation built on May 2, 2019, 12:10 p.m.
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Description Usage Arguments Value Author(s) References
Description
the function calculates the starting values of the performance mean and the error variance for the optimization of HAPimLD method. It can be viewed as an internal function. The user does not have to call it by himself.
Usage
1 | depart.LD(perf, CD)
|
Arguments
perf |
numeric vector of length=number of individuals which contains the performances of individuals. |
CD |
numeric vector of length=number of individuals which contains the CD of individuals. |
Value
The value returned is a numeric vector of length=2 which contains estimates of the performance mean and the error variance.
Author(s)
S. Dejean, N. Oumouhou, D. Estivals, B. Mangin
References
publication to be submitted: C. Cierco-Ayrolles, S. Dejean, A. Legarra, H. Gilbert, T. Druet, F. Ytournel, D. Estivals, N. Oumouhou and B. Mangin. Combining linkage analysis and linkage disequilibrium for QTL fine mapping in animal pedigrees.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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