pi.hap.NI: haplotype frequencies

Description Usage Arguments Value Author(s) References See Also

Description

This function computes the observed frequencies of each haplotype. The function can be viewed as an internal function. The user does not have to call it by himself.

Usage

1
pi.hap.NI(res.structure, cor.hap)

Arguments

res.structure

results provided by structure.hap() function, list of objects.

cor.hap

results provided by corresp() function, list of numeric objects.

Value

The returned value is a list of numeric vectors containing haplotypes freqencies estimated on haplotypes with non missing information.

Author(s)

S. Dejean, N. Oumouhou, D. Estivals, B. Mangin

References

publication to be submitted: C. Cierco-Ayrolles, S. Dejean, A. Legarra, H. Gilbert, T. Druet, F. Ytournel, D. Estivals, N. Oumouhou and B. Mangin. Combining linkage analysis and linkage disequilibrium for QTL fine mapping in animal pedigrees.

See Also

structure.hap


HAPim documentation built on May 30, 2017, 3:13 a.m.