Files in MoBPS
Modular Breeding Program Simulator

MD5

NAMESPACE

DESCRIPTION

R/kinship.development.R R/compute.costs.cohorts.R R/get.gen.effect.R R/exist.cohort.R R/get.infos.R R/get.phylogenetic.tree.R R/find.chromo.R R/set.mean.pool.R R/founder.simulation.R R/get.pheno.time.R R/set.default.R R/get.qtl.R R/group.diff.R R/breeding.intern2.R R/ogc.mobps.R R/compute.snps.R R/get.cohorts.R R/get.culling.time.R R/get.pheno.off.count.R R/get.selectionbve.R R/bv.development.box.R R/get.pheno.off.R R/set.age.point.R R/pedmap.to.phasedbeaglevcf.R R/get.haplo.R R/breeding.intern7.R R/add.fixed.effects.R R/get.ngen.R R/matrix.posdef.R R/get.cullingtime.R R/add.combi.R R/scaling.relationship.R R/get.size.R R/derive.loop.elements.R R/get.bv.R R/get.cohorts.individual.R R/get.computing.time.R R/breeding.intern8.R R/get.maf.R R/get.pedigree.R R/kinship.emp.R R/clean.up.R R/get.pedmap.R R/recalculate.bv.R R/breeding.intern.R R/inbreeding.emp.R R/get.litter.R R/new.base.generation.R R/get.dendrogram.R R/set.class.R R/get.class.R R/compute.costs.R R/get.npheno.R R/add.array.R R/kinship.exp.store.R R/analyze.population.R R/add.founder.kinship.R R/add.diversity.R R/get.selectionindex.R R/sortd.R R/get.nindi.R R/get.database.R R/summary.population.R R/bv.standardization.R R/get.pool.R R/get.pheno.R R/ld.decay.R R/OGC.R R/get.litter.effect.R R/vlist.R R/demiraculix.R R/get.is.last.R R/effect.estimate.add.R R/get.snapshot.single.R R/get.culling.type.R R/get.plink.R R/breeding.diploid.R R/set.time.point.R R/get.pedigree.visual.R R/get.is.first.R R/creating.trait.R R/breeding.intern5.R R/merging.cohorts.R R/insert.pheno.single.R R/get.id.R R/find.snpbefore.R R/example.dataset.R R/get.effect.freq.R R/generation.individual.R R/get.allele.freq.R R/optimize.cores.R R/recombination.function.haldane.R R/breeding.intern1.R R/get.creating.type.R R/check.parents.R R/creating.phenotypic.transform.R R/breeding.intern3.R R/get.genotyped.snp.R R/get.genotyped.R R/edges.fromto.R R/get.dendrogram.heatmap.R R/recalculate.manual.R R/get.vcf.R R/get.pool.founder.R R/get.snapshot.R R/breeding.intern6.R R/merge.trait.R R/get.admixture.R R/calculate.bv.R R/mutation.intro.R R/combine.traits.R R/get.reliabilities.R R/effective.size.R R/get.death.point.R R/creating.diploid.R R/get.sex.R R/get.time.point.R R/inbreeding.exp.R R/get.pen.R R/bv.development.R R/plot.population.R R/get.uhat.R R/get.distance.R R/insert.bve.R R/json.simulation.R R/codeOriginsR.R R/get.recombi.R R/rename.cohort.R R/bitwise.storing.R R/write.pedigree.mixblup.R R/miraculix.R R/get.map.R R/get.bve.R R/analyze.bv.R R/diag.mobps.R R/get.index.R R/miesenberger.index.R R/add.diag.R R/get.trafo.p.R R/get.fixed.effects.p.R R/get.effective.size.R R/get.trafo.p.single.R R/get.age.point.R R/get.variance.R R/get.variance.components.R R/edit.animal.R R/get.pheno.single.R R/ssGBLUP.R R/get.pca.R R/rowMedian.R R/get.dendrogram.trait.R R/startup.R R/breeding.intern4.R R/get.geno.time.R R/pedigree.simulation.R R/epi.R R/get.geno.R

data/ex_json.RData

data/sheep_chip.RData

data/ex_pop.RData

data/chicken_chip.RData

data/pig_chip.RData

data/cattle_chip.RData

data/maize_chip.RData

MoBPS documentation built on Nov. 5, 2025, 6:26 p.m.

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MoBPS
Modular Breeding Program Simulator

Files in MoBPS
Modular Breeding Program Simulator

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MoBPS Modular Breeding Program Simulator

Files in MoBPS Modular Breeding Program Simulator

R Package Documentation

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MoBPS
Modular Breeding Program Simulator

Files in MoBPS
Modular Breeding Program Simulator