tests/testthat/test-get_significant_single_tissue_eqtls.R

In gtexr: Query the GTEx Portal API

test_that("`get_significant_single_tissue_eqtls()` returns tibble with expected colnames",
          {
            skip_if_offline()
            result <- suppressWarnings(
              get_significant_single_tissue_eqtls(gencodeIds = "ENSG00000132693.12", itemsPerPage = 1)
            )

            expect_s3_class(result, "tbl_df")

            expect_identical(
              names(result),
              c(
                "snpId",
                "pos",
                "snpIdUpper",
                "variantId",
                "geneSymbol",
                "pValue",
                "geneSymbolUpper",
                "datasetId",
                "tissueSiteDetailId",
                "ontologyId",
                "chromosome",
                "gencodeId",
                "nes"
              )
            )
          })