tests/testthat/test-get_tissue_site_detail.R

test_that("`get_tissue_site_detail()` returns tibble with expected colnames",
          {
            skip_if_offline()
            result <- get_tissue_site_detail(itemsPerPage = 1) |>
              suppressWarnings()

            expect_s3_class(result, "tbl_df")

            expect_identical(
              names(result),
              c(
                "tissueSiteDetailId",
                "colorHex",
                "colorRgb",
                "datasetId",
                "eGeneCount",
                "expressedGeneCount",
                "hasEGenes",
                "hasSGenes",
                "mappedInHubmap",
                "eqtlSampleSummary",
                "rnaSeqSampleSummary",
                "sGeneCount",
                "samplingSite",
                "tissueSite",
                "tissueSiteDetail",
                "tissueSiteDetailAbbr",
                "ontologyId",
                "ontologyIri"
              )
            )
          })

Try the gtexr package in your browser

Any scripts or data that you put into this service are public.

gtexr documentation built on Sept. 19, 2024, 5:06 p.m.