getOmaMembers: Get OMA members
In BIONF/PhyloProfile: PhyloProfile
View source: R/getOmaBrowser.R
getOmaMembers R Documentation
Get OMA members
Description
Get OMA ortholog group, OMA HOG or OMA pair's members for a
seed protein from OMA Browser.
Usage
getOmaMembers(id = NULL, orthoType = "OG")
Arguments
id
ID of the seed protein (OMA or UniProt ID)
orthoType
type of OMA orthologs: either "HOG", "OG"
(orthologous group) or "PAIR" (orthologous pair - CURRENTLY NOT WORKING).
Default = "OG".
Value
List of OMA orthologs for an input seed protein.
Author(s)
Carla Mölbert carla.moelbert@gmx.de
Examples
print("Uncomment the following line to run the function")
# getOmaMembers("HUMAN29397", "OG")
BIONF/PhyloProfile documentation built on April 14, 2024, 10:39 p.m.
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View source: R/getOmaBrowser.R
| getOmaMembers | R Documentation |
Get OMA members
Description
Get OMA ortholog group, OMA HOG or OMA pair's members for a seed protein from OMA Browser.
Usage
getOmaMembers(id = NULL, orthoType = "OG")
Arguments
id |
ID of the seed protein (OMA or UniProt ID) |
orthoType |
type of OMA orthologs: either "HOG", "OG" (orthologous group) or "PAIR" (orthologous pair - CURRENTLY NOT WORKING). Default = "OG". |
Value
List of OMA orthologs for an input seed protein.
Author(s)
Carla Mölbert carla.moelbert@gmx.de
Examples
print("Uncomment the following line to run the function")
# getOmaMembers("HUMAN29397", "OG")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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