getSelectedFastaOma: Get selected fasta sequences from a raw OMA dataframe
In BIONF/PhyloProfile: PhyloProfile
View source: R/getOmaBrowser.R
getSelectedFastaOma R Documentation
Get selected fasta sequences from a raw OMA dataframe
Description
Get selected fasta sequences from a raw OMA dataframe
Usage
getSelectedFastaOma(finalOmaDf = NULL, seqID = NULL)
Arguments
finalOmaDf
raw OMA data for a list of proteins (see ?getDataForOneOma)
seqID
OMA ID of selected protein
Value
Required protein sequence in fasta format.
Author(s)
Vinh Tran tran@bio.uni-frankfurt.de
See Also
getDataForOneOma
Examples
### Uncomment the following line to run the function
# omaData <- getDataForOneOma("HUMAN29397", "OG")
# getSelectedFastaOma(omaData, "HUMAN29397")
BIONF/PhyloProfile documentation built on Aug. 3, 2024, 11:53 a.m.
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View source: R/getOmaBrowser.R
| getSelectedFastaOma | R Documentation |
Get selected fasta sequences from a raw OMA dataframe
Description
Get selected fasta sequences from a raw OMA dataframe
Usage
getSelectedFastaOma(finalOmaDf = NULL, seqID = NULL)
Arguments
finalOmaDf |
raw OMA data for a list of proteins (see ?getDataForOneOma) |
seqID |
OMA ID of selected protein |
Value
Required protein sequence in fasta format.
Author(s)
Vinh Tran tran@bio.uni-frankfurt.de
See Also
getDataForOneOma
Examples
### Uncomment the following line to run the function
# omaData <- getDataForOneOma("HUMAN29397", "OG")
# getSelectedFastaOma(omaData, "HUMAN29397")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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