processOrthoID: Process ortholog IDs
In BIONF/PhyloProfile: PhyloProfile
View source: R/createProfilePlot.R
processOrthoID R Documentation
Process ortholog IDs
Description
Process ortholog IDs to identify duplicated IDs
Usage
processOrthoID(dataHeat = NULL)
Arguments
dataHeat
a data frame contains processed profiles (see
?fullProcessedProfile, ?filterProfileData)
Value
the same dataframe as input, but the ortholog IDs are changed into
<taxID:orthoID>. New column orthoFreq specifies if the ortholog IDs are
single or duplicated
Author(s)
Vinh Tran tran@bio.uni-frankfurt.de
Examples
?processOrthoID
## Not run:
data("finalProcessedProfile", package="PhyloProfile")
processOrthoID(finalProcessedProfile)
## End(Not run)
BIONF/PhyloProfile documentation built on April 14, 2024, 10:39 p.m.
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View source: R/createProfilePlot.R
| processOrthoID | R Documentation |
Process ortholog IDs
Description
Process ortholog IDs to identify duplicated IDs
Usage
processOrthoID(dataHeat = NULL)
Arguments
dataHeat |
a data frame contains processed profiles (see ?fullProcessedProfile, ?filterProfileData) |
Value
the same dataframe as input, but the ortholog IDs are changed into <taxID:orthoID>. New column orthoFreq specifies if the ortholog IDs are single or duplicated
Author(s)
Vinh Tran tran@bio.uni-frankfurt.de
Examples
?processOrthoID
## Not run:
data("finalProcessedProfile", package="PhyloProfile")
processOrthoID(finalProcessedProfile)
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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