rankIndexing: Indexing all available ranks (including norank)

rankIndexingR Documentation

Indexing all available ranks (including norank)

Description

Indexing all available ranks (including norank)

Usage

rankIndexing(rankListFile = NULL)

Arguments

rankListFile

Input file, where each row is a rank list of a taxon (see rankListFile in example)

Value

A dataframe containing a list of all possible ranks and their indexed values.

Author(s)

Vinh Tran tran@bio.uni-frankfurt.de

Examples

rankListFile <- system.file(
    "extdata", "data/rankList.txt", package = "PhyloProfile", mustWork = TRUE
)
PhyloProfile:::rankIndexing(rankListFile)

BIONF/PhyloProfile documentation built on Sept. 4, 2024, 11:45 a.m.