xmlParser: Parse orthoXML input file
In BIONF/PhyloProfile: PhyloProfile
View source: R/parseMainInput.R
xmlParser R Documentation
Parse orthoXML input file
Description
Parse orthoXML input file
Usage
xmlParser(inputFile = NULL)
Arguments
inputFile
input file in xml format
Value
A data frame of input data in long-format containing seed gene IDs (
or orthologous group IDs), their orthologous proteins together with the
corresponding taxonomy IDs and values of (up to) two additional variables.
Author(s)
Vinh Tran tran@bio.uni-frankfurt.de
Examples
inputFile <- system.file(
"extdata", "test.main.xml", package = "PhyloProfile", mustWork = TRUE
)
xmlParser(inputFile)
BIONF/PhyloProfile documentation built on Dec. 18, 2024, 7:33 a.m.
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View source: R/parseMainInput.R
| xmlParser | R Documentation |
Parse orthoXML input file
Description
Parse orthoXML input file
Usage
xmlParser(inputFile = NULL)
Arguments
inputFile |
input file in xml format |
Value
A data frame of input data in long-format containing seed gene IDs ( or orthologous group IDs), their orthologous proteins together with the corresponding taxonomy IDs and values of (up to) two additional variables.
Author(s)
Vinh Tran tran@bio.uni-frankfurt.de
Examples
inputFile <- system.file(
"extdata", "test.main.xml", package = "PhyloProfile", mustWork = TRUE
)
xmlParser(inputFile)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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