sampleInfiltrationPlotsSingleFile: Organize and print multiple sample summaries on a page or two

Description Usage Arguments Value

View source: R/plots.R

Description

For each marker set in list of plots organized by markerSet, population, then sample, gather all sample plots for a single population, organizing with each row including a single patient and each column including a treatment

Usage

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sampleInfiltrationPlotsSingleFile(den, allPlots, numPtsPerPage = 4,
  ncol = NULL, nrow = NULL)

Arguments

den

density table including Sample_name, Patient, and Response in addition to standard density data NOTE: currently Sample_name MUST be in the form "Pt[X]_[ResponseX]", e.g., "Pt1_UT1" or "Pt1_PR"

allPlots

list of plots organized by markerSet, population, sample, [summary], [absolute|percentage]

numPtsPerPage

number of cases to plot on each page

Value

nothing


caitlinjones/halo documentation built on May 7, 2019, 8 a.m.