API for CONFESS
Cell OrderiNg by FluorEScence Signal

Global functions
BGcorrectFluo	Man page Source code
BatchFluo	Man page Source code
CVsampler	Man page
DDHFfit	Man page Source code
DDHFinput	Man page Source code
FluoInspection	Man page Source code
FluoSelection_byRun	Man page Source code
Fluo_CV_modeling	Man page Source code
Fluo_CV_prep	Man page Source code
Fluo_adjustment	Man page Source code
Fluo_inspection	Man page Source code
Fluo_modeling	Man page Source code
Fluo_ordering	Man page Source code
GAPanalysis	Man page
GrubbsOutliers	Man page Source code
LocationMatrix	Man page Source code
Results	Man page
SpotStats	Man page Source code
SpotbyStrLines	Man page Source code
addKpredictions	Man page
adjustFluo	Man page Source code
aveDiff	Man page
boxFluo	Man page Source code
boxcoxMatrix	Man page Source code
boxcoxMatrixEst	Man page Source code
caseof0s	Man page Source code
caseof1R0G	Man page Source code
caseof1R1G	Man page Source code
caseof1R2G	Man page Source code
caseof2R1G	Man page Source code
caseof2R2G	Man page Source code
caseof2Rs0G	Man page Source code
clu	Man page
cluster2outlier	Man page Source code
contrastFluo	Man page Source code
cpPELT	Man page
cpoints	Man page
createFluo	Man page Source code
cutpointsEstimator	Man page
ddhft.np.2	Man page
defineLocClusters	Man page Source code
denoisefun	Man page Source code
denoiser	Man page Source code
despecklefun	Man page Source code
diagnoseResiduals	Man page Source code
distfromcenter	Man page Source code
doTransform	Man page Source code
estimate.new.pseudotimes	Man page
estimatePath	Man page
estimates	Man page
estimates.2	Man page
extractBFArea	Man page Source code
failurecase	Man page Source code
fclust	Man page Source code
files	Man page
filled.contour3	Man page
findPattern	Man page Source code
fixPath	Man page
flowclust_step1	Man page Source code
flowclust_step2	Man page Source code
forceBF	Man page Source code
function.from.vector	Man page Source code
getCoordinates_stats	Man page Source code
getCsFAIL	Man page Source code
getFluo	Man page Source code
getFluo_byRun	Man page Source code
getSpot	Man page Source code
giveWarning	Man page Source code
grouplines	Man page Source code
grubbs	Man page Source code
highlight.cols	Man page Source code
invTransform	Man page Source code
isotone	Man page
joinAreas	Man page Source code
listSorter	Man page
lmFluo	Man page Source code
mean_signal	Man page Source code
measureB	Man page Source code
measureF	Man page Source code
multiplot	Man page Source code
myt	Man page Source code
orderFluo	Man page
path.initiator	Man page
pathEstimator	Man page Source code
pathUpdater	Man page
plotImages	Man page Source code
plot_clusgap	Man page
predict.kmeans	Man page
processImg	Man page Source code
project	Man page
readChaImg	Man page Source code
readFiles	Man page Source code
readOriImg	Man page Source code
reestimate.pseudos.byCV	Man page
refineMixes	Man page Source code
revDDHFinput	Man page Source code
signal.from.matrix	Man page Source code
significantSignal	Man page Source code
simcells	Man page Source code
sortCentroids	Man page
spot.simulator	Man page Source code
spotCenter	Man page Source code
spotCoords	Man page Source code
spotEstimator	Man page Source code
step1	Man page
step2	Man page
step2.1	Man page
step3	Man page
step3.1	Man page
step4	Man page
steps2_4	Man page
straightColLines	Man page Source code
straightRowLines	Man page Source code
subsetAnalysis	Man page Source code
summarizeAdjFluo	Man page Source code
transformFluo	Man page
trigofun	Man page
unnormalizeC01	Man page Source code
updateCentroids	Man page Source code
updateCentroidsPaths	Man page
which.min.diff	Man page Source code
zoomInBF	Man page Source code