Files in CONFESS

Cell OrderiNg by FluorEScence Signal

R/fluo_est.R R/fluo_NBE.R R/simulator.R R/internal_fluo_est.R R/cases.R R/internal_fluo_NBE.R R/internal_DDHF.R vignettes/vignette.Rmd man/estimates.Rd man/denoisefun.Rd man/GAPanalysis.Rd man/myt.Rd man/grouplines.Rd man/caseof0s.Rd man/findPattern.Rd man/readOriImg.Rd man/summarizeAdjFluo.Rd man/createFluo.Rd man/adjustFluo.Rd man/predict.kmeans.Rd man/mean_signal.Rd man/denoiser.Rd man/flowclust_step1.Rd man/plot_clusgap.Rd man/SpotbyStrLines.Rd man/listSorter.Rd man/LocationMatrix.Rd man/DDHFinput.Rd man/function.from.vector.Rd man/step3.Rd man/Results.Rd man/fclust.Rd man/getFluo_byRun.Rd man/filled.contour3.Rd man/transformFluo.Rd man/ddhft.np.2.Rd man/BGcorrectFluo.Rd man/project.Rd man/defineLocClusters.Rd man/cutpointsEstimator.Rd man/FluoInspection.Rd man/addKpredictions.Rd man/grubbs.Rd man/caseof2Rs0G.Rd man/Fluo_modeling.Rd man/step1.Rd man/reestimate.pseudos.byCV.Rd man/boxcoxMatrixEst.Rd man/readChaImg.Rd man/spot.simulator.Rd man/pathUpdater.Rd man/flowclust_step2.Rd man/cpoints.Rd man/unnormalizeC01.Rd man/fixPath.Rd man/straightColLines.Rd man/diagnoseResiduals.Rd man/measureF.Rd man/Fluo_ordering.Rd man/zoomInBF.Rd man/refineMixes.Rd man/clu.Rd man/invTransform.Rd man/estimatePath.Rd man/giveWarning.Rd man/steps2_4.Rd man/spotEstimator.Rd man/boxcoxMatrix.Rd man/simcells.Rd man/readFiles.Rd man/extractBFArea.Rd man/aveDiff.Rd man/estimates.2.Rd man/cpPELT.Rd man/subsetAnalysis.Rd man/path.initiator.Rd man/distfromcenter.Rd man/SpotStats.Rd man/files.Rd man/orderFluo.Rd man/straightRowLines.Rd man/which.min.diff.Rd man/failurecase.Rd man/getFluo.Rd man/caseof1R2G.Rd man/Fluo_CV_modeling.Rd man/signal.from.matrix.Rd man/caseof2R1G.Rd man/caseof2R2G.Rd man/step4.Rd man/step3.1.Rd man/caseof1R0G.Rd man/spotCenter.Rd man/GrubbsOutliers.Rd man/trigofun.Rd man/Fluo_inspection.Rd man/updateCentroids.Rd man/updateCentroidsPaths.Rd man/cluster2outlier.Rd man/BatchFluo.Rd man/forceBF.Rd man/spotCoords.Rd man/getSpot.Rd man/estimate.new.pseudotimes.Rd man/getCsFAIL.Rd man/measureB.Rd man/CVsampler.Rd man/despecklefun.Rd man/highlight.cols.Rd man/getCoordinates_stats.Rd man/FluoSelection_byRun.Rd man/Fluo_adjustment.Rd man/boxFluo.Rd man/pathEstimator.Rd man/step2.1.Rd man/sortCentroids.Rd man/caseof1R1G.Rd man/Fluo_CV_prep.Rd man/lmFluo.Rd man/isotone.Rd man/processImg.Rd man/significantSignal.Rd man/revDDHFinput.Rd man/joinAreas.Rd man/step2.Rd man/multiplot.Rd man/plotImages.Rd man/doTransform.Rd man/DDHFfit.Rd man/contrastFluo.Rd inst/doc/vignette_tex.pdf inst/doc/vignette_tex.R inst/doc/vignette.R inst/doc/vignette.Rmd