mapFileSet: Deposit data of one sample to a fileSet (and hence to file)

In sesame: Tools For Analyzing Illumina Infinium DNA Methylation Arrays

Description

Deposit data of one sample to a fileSet (and hence to file)

Usage

mapFileSet(fset, sample, named_values)

Arguments

fset	a sesame::fileSet, as obtained via readFileSet
sample	sample name as a string
named_values	value vector named by probes

Value

a sesame::fileSet

Examples

## create two samples
fset <- initFileSet('mybetas2', 'HM27', c('s1','s2'))

## a hypothetical numeric array (can be beta values, intensities etc)
hypothetical <- setNames(runif(fset$n), fset$probes)

## map the numeric to file
mapFileSet(fset, 's1', hypothetical)

## get data
sliceFileSet(fset, 's1', 'cg00000292')

sesame documentation built on Nov. 15, 2020, 2:08 a.m.