totalIntensityZscore: Calculate intensity Z-score
In sesame: Tools For Analyzing Illumina Infinium DNA Methylation Arrays
Description
Usage
Arguments
Value
Examples
Description
This function compute intensity Z-score with respect to the mean.
Log10 transformation is done first. Probes of each design type are
grouped before Z-scores are computed.
Usage
1
totalIntensityZscore(sset)
Arguments
sset
a SigSet
Value
a vector of Z-score for each probe
Examples
1
2
sset <- sesameDataGet('HM450.1.TCGA.PAAD')$sset
head(totalIntensityZscore(sset))
sesame documentation built on Nov. 15, 2020, 2:08 a.m.
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Description Usage Arguments Value Examples
Description
This function compute intensity Z-score with respect to the mean. Log10 transformation is done first. Probes of each design type are grouped before Z-scores are computed.
Usage
1 | totalIntensityZscore(sset)
|
Arguments
sset |
a |
Value
a vector of Z-score for each probe
Examples
1 2 | sset <- sesameDataGet('HM450.1.TCGA.PAAD')$sset
head(totalIntensityZscore(sset))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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