format_db_rps10: Create modified reference rps10 database for downstream...

In demulticoder: Simultaneous Analysis of Multiplexed Metabarcodes

Create modified reference rps10 database for downstream analysis

Description

Create modified reference rps10 database for downstream analysis

Usage

format_db_rps10(
  data_tables,
  data_path,
  output_directory_path,
  temp_directory_path,
  db_rps10
)

Arguments

data_tables	The data tables containing the paths to read files, metadata, and metabarcode information with associated primer sequences
data_path	Path to the data directory
output_directory_path	The path to the directory where resulting files are output
temp_directory_path	User-defined temporary directory to output unfiltered, trimmed, and filtered read directories throughout the workflow
db_rps10	The oomyceteDB rps10 reference database provided by the user

Value

The oomyceteDB database with modified headers

demulticoder documentation built on June 8, 2025, 12:47 p.m.