process_single_barcode: Run 'DADA2' taxonomy functions for single metabarcode
In demulticoder: Simultaneous Analysis of Multiplexed Metabarcodes
View source: R/assign_taxonomy.R
process_single_barcode R Documentation
Run 'DADA2' taxonomy functions for single metabarcode
Description
Run 'DADA2' taxonomy functions for single metabarcode
Usage
process_single_barcode(
data_tables,
temp_directory_path,
output_directory_path,
asv_abund_matrix,
metabarcode = metabarcode,
barcode_params
)
Arguments
data_tables
The data tables containing the paths to read files, metadata, and metabarcode information with associated primer sequences
asv_abund_matrix
The final abundance matrix containing amplified sequence variants
demulticoder documentation built on June 8, 2025, 12:47 p.m.
R Package Documentation
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View source: R/assign_taxonomy.R
| process_single_barcode | R Documentation |
Run 'DADA2' taxonomy functions for single metabarcode
Description
Run 'DADA2' taxonomy functions for single metabarcode
Usage
process_single_barcode(
data_tables,
temp_directory_path,
output_directory_path,
asv_abund_matrix,
metabarcode = metabarcode,
barcode_params
)
Arguments
data_tables |
The data tables containing the paths to read files, metadata, and metabarcode information with associated primer sequences |
asv_abund_matrix |
The final abundance matrix containing amplified sequence variants |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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