make_abund_matrix: Quality filtering to remove chimeras and short sequences
In demulticoder: Simultaneous Analysis of Multiplexed Metabarcodes
View source: R/make_asv_abund_matrix.R
make_abund_matrix R Documentation
Quality filtering to remove chimeras and short sequences
Description
Quality filtering to remove chimeras and short sequences
Usage
make_abund_matrix(
raw_seqtab,
temp_directory_path,
barcode_params = barcode_params,
barcode
)
Arguments
raw_seqtab
An RData file containing intermediate read data before chimeras were removed
Value
asv_abund_matrix The returned final ASV abundance matrix
demulticoder documentation built on June 8, 2025, 12:47 p.m.
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View source: R/make_asv_abund_matrix.R
| make_abund_matrix | R Documentation |
Quality filtering to remove chimeras and short sequences
Description
Quality filtering to remove chimeras and short sequences
Usage
make_abund_matrix(
raw_seqtab,
temp_directory_path,
barcode_params = barcode_params,
barcode
)
Arguments
raw_seqtab |
An RData file containing intermediate read data before chimeras were removed |
Value
asv_abund_matrix The returned final ASV abundance matrix
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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